Abstract: The amount of genetic structure in marine invertebrates is often thought to be negatively correlated with larval duration. However, larval retention may increase genetic structure in species with long-lived planktonic larvae, and rafting provides a means of dispersal for species that lack a larval dispersal phase. We compared genetic structure, demographic histories and levels of gene Xow of regional lineages (in most cases deWned by biogeographic region) of Wve southern African coastal invertebrates with three main types of larval development: (1) dispersal by long-lived planktonic larvae (mudprawn Upogebia africana and brown mussel Perna perna), (2) abbreviated larval development (crown crab Hymenosoma orbiculare) and (3) direct development (estuarine isopod Exosphaeroma hylecoetes and estuarine cumacean Iphinoe truncata). We hypothesized that H. orbiculare, having abbreviated larval development, would employ a strategy of larval retention, resulting in genetic structure comparable to that of the direct developers rather than the planktonic dispersers. However, regional population structure was signiWcantly lower in all species with planktonic larvae, including H. orbiculare, than in the direct developers. Moreover, nested clade analysis identiWed demographic histories resulting from low levels of gene Xow (isolation by distance and allopatric fragmentation) in the direct developers only, and migration rates were signiWcantly higher in all three species having planktonic larvae than in the direct developers. We conclude that the amount of genetic structure within marine biogeographic regions strongly depends on the presence or absence of free-swimming larvae. Whether such larvae are primarily exported or retained, whether they have long or short larval duration, and whether or not they are capable of active dispersal seems to have little eVect on connectivity among populations.

Abstract: Recent genetic studies have shown that most widely distributed, passively dispersing invertebrates in southern Africa have regional intraspecific units that are associated with the three main marine biogeographic provinces (cool-temperate, warm-temperate and subtropical). The caridean shrimp Palaemon peringueyi also occurs in all three provinces, but the fact that it can disperse both actively and passively (i.e. larval drifting, adult walking/swimming and potential adult rafting by means of floating objects) suggests that the amount of gene flow between regions may be too high for evolutionary divergence to have taken place. Samples of P. peringueyi were collected throughout South Africa and an intraspecific phylogeny was reconstructed using mitochondrial COI and 16S rRNA sequences. Three major clades were recovered, which were broadly associated with the three biogeographic regions. This suggests that, even though P. peringueyi can disperse actively, the fact that neither larvae nor adults are strong swimmers has resulted in genetic subdivisons comparable to those of passively dispersing coastal invertebrates in southern Africa.

Abstract: The southern African tick shell, Nassarius kraussianus (Dunker, 1846), has been identified as being the earliest known ornamental object used by human beings. Shell beads dated from ~75,000 years ago (Pleistocene era) were found in a cave located on South Africa’s south coast. Beads made from N. kraussianus shells have also been found in deposits in this region dating from the beginning of the Holocene era (~10,000 years ago). These younger shells were significantly smaller, a phenomenon that has been attributed to a change in human preference. We investigated two alternative hypotheses explaining the difference in shell size: a) N. kraussianus comprises at least two genetic lineages that differ in size; b) the difference in shell size is due to phenotypic plasticity and is a function of environmental conditions. To test these hypotheses, we first reconstructed the species’ phylogeographic history, and second, we measured the shell sizes of extant individuals throughout South Africa. Although two genetic lineages were identified, the sharing of haplotypes between these suggests that there is no genetic basis for the size differences. Extant individuals from the cool temperate west coast had significantly larger shells than populations in the remainder of the country, suggesting that N. kraussianus grows to a larger size in colder water. The decrease in fossil shell size from Pleistocene to Holocene was likely due to increased temperatures as a result of climate change at the beginning of the present interglacial period. We hypothesise that the sizes of N. kraussianus fossil shells can therefore serve as indicators of the climatic conditions that were prevalent in a particular region at the time when they were deposited. Moreover, N. kraussianus could serve as a biomonitor to study the impacts of future climate change on coastal biota in southern Africa.

Abstract: Specimens of four sympatric intertidal limpet species (Siphonaria dayi, S. tenuicostulata, S. anneae and S. nigerrima ) were collected from four localities on the east coast of South Africa and southern Mozambique. Their phylogenetic relationships were investigated using sequences of the mitochondrial COI gene and the intron-containing nuclear ATPSb gene. Two closely related lineages were recovered, which grouped specimens on the basis of geography rather than morphology. One lineage was associated with the subtropical coastline of South Africa’s east coast and the other with the tropical coastline of northeastern South Africa and southern Mozambique. This genetic discontinuity coincides with a biogeographic boundary located in the vicinity of Cape St Lucia. Combined genetic diversity of the four species was lower than that of three other southern African congeners, and fell within the range determined for single southern African marine mollusc species. We suggest that the four limpet species are in fact different morphotypes of a single species.

Abstract: The Knysna seahorse, Hippocampus capensis, is an endangered teleost confined to three South African estuaries. Its abundance within these systems is low and distributions are patchy. Consequently, monitoring population sizes is labour-intensive. The aim of this study was to establish if Knynsa seahorses are associated with specific regions within the estuaries, on which conservation efforts could concentrate. The relationship of Knysna seahorses with aquatic vegetation was analysed in the Knysna Estuary (the largest of the three estuarine systems inhabited by H. capensis) to determine whether this species shows a preference for a particular plant species, vegetation density or vegetation height. Seahorses were associated with five dominant aquatic plants: Zostera capensis, Caulerpa filiformis, Codium extricatum, Halophila ovalis and Ruppia cirrhosa. Together, these comprised 96% of the submerged objects with which seahorses were associated. The relative abundance of plant species changed along the estuary, but seahorses were present throughout the system, except at the estuary mouth, which was characterized by low plant densities and strong currents. No significant difference was found between the proportion of plant species present in a particular region of the estuary and the proportion of plants that seahorses used as holdfasts. However, when Z. capensis and C. filiformis were present at the same sites, adult seahorses preferred C. filiformis as holdfast. Adult seahorse density (individuals/m2) was significantly correlated with percentage vegetation cover and with holdfast length, but juvenile seahorse density was not. Nonetheless, significantly more adult and juvenile seahorses were found at sites characterized by high vegetation cover (>75%) than at sites with lower cover. Our results indicate that although there is some evidence that Knynsa seahorses prefer certain plant species over others, they are likely to be encountered anywhere in the estuary where aquatic plants are present. Conservation efforts in the Knysna Estuary should thus concentrate on such vegetated areas, which comprise approximately 11% of the total submerged surface area.