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<feed xmlns="http://www.w3.org/2005/Atom" xml:lang="en"><id>http://publicationslist.org/data/saman.majeed/atom.xml</id><title>Dr Saman ZEESHAN 's Publications List</title>
<link rel="self" type="application/atom+xml" href="http://publicationslist.org/data/saman.majeed/atom.xml"/><link rel="alternate" type="text/html" href="http://publicationslist.org/saman.majeed"/><author><name>Dr Saman ZEESHAN </name><uri>http://publicationslist.org/saman.majeed</uri></author><icon>$basepathfavicon.ico</icon><subtitle>Recent additions to Dr Saman ZEESHAN 's PublicationsList.org page</subtitle><logo>http://publicationslist.org/publications.png</logo><updated>2014-11-26T18:38:05Z</updated>

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<id>http://publicationslist.org/saman.majeed/refid33</id>
<updated>2014-11-26T18:35:52Z</updated>
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<title type='html'>'Isotopo'  a Database Application for Facile Analysis and Management of Mass Isotopomer Data.</title>
<summary type='html'>Z Ahmed, Saman Zeeshan, C Huber, M Hensel, D Schomburg, R Muench, E Eylert, W Eisenreich, T Dandekar (2014)  &lt;i&gt;Database: The Journal of Biological Databases and Curation, Oxford University Press&lt;/i&gt; 2014:  &lt;br/&gt;</summary>
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<id>http://publicationslist.org/saman.majeed/refid17</id>
<updated>2014-10-22T17:29:12Z</updated>
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<title type='html'> Measurement, Analysis with Visualization for better Reliability</title>
<summary type='html'>Z. Ahmed, Saman Zeeshan (2014)  &lt;i&gt; Cover Design: Pineapple Design Ltd. 1st Edition:  Artificial Intelligence and Hybrid Systems&lt;/i&gt; 18&lt;br/&gt;</summary>
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<id>http://publicationslist.org/saman.majeed/refid41</id>
<updated>2014-11-26T18:37:58Z</updated>
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<title type='html'>Lipid-Pro: A computational lipid identification solution for untargeted lipidomics on data-independent acquisition tandem mass spectrometry platforms</title>
<summary type='html'>Z Ahmed, Michel M, Saman Zeeshan, Dandekar T, Mueller M, and Fekete A. (2014)  &lt;i&gt;Bioinformatics&lt;/i&gt; [In Press]:  &lt;br/&gt;</summary>
</entry>
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<id>http://publicationslist.org/saman.majeed/refid22</id>
<updated>2014-11-26T18:36:47Z</updated>
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<title type='html'>Software Applications toward Quantitative Metabolic Flux Analysis and Visualization</title>
<summary type='html'>T. Dandekar, A. Fieselmann, Saman Zeeshan and Z. Ahmed (2014)  &lt;i&gt;Briefings in Bioinformatics, Oxford University Press&lt;/i&gt; 15: 1 91-107&lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid35</id>
<updated>2014-11-26T18:36:31Z</updated>
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<title type='html'> Developing sustainable software solutions for bioinformatics by the &quot;Butterfly&quot; paradigm</title>
<summary type='html'>Z Ahmed, Saman Zeeshan, T Dandekar (2014)  &lt;i&gt;F1000Research&lt;/i&gt; 3: 71 &lt;br/&gt;</summary>
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<id>http://publicationslist.org/saman.majeed/refid34</id>
<updated>2014-11-26T18:37:06Z</updated>
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<title type='html'> Cultivating Software Solutions Development in the Scientific Academia</title>
<summary type='html'>Z Ahmed, Saman Zeeshan (2014)  &lt;i&gt; Recent Patents on Computer Science&lt;/i&gt; 7: 1 &lt;br/&gt;</summary>
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<entry>
<id>http://publicationslist.org/saman.majeed/refid38</id>
<updated>2014-10-22T17:35:42Z</updated>
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<title type='html'>Supplementary Material: &quot;Isotopo&quot;  a Database Application for Facile Analysis and Management of Mass Isotopomer Data. </title>
<summary type='html'>Z Ahmed, Saman Zeeshan, Huber C, Hensel M, Schomburg D, Muench R, Eylert E, Eisenreich W, Dandekar T.  (2014)  &lt;i&gt;Database: The Journal of Biological Databases and Curation, Oxford University Press.&lt;/i&gt;&lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid36</id>
<updated>2014-10-22T17:31:25Z</updated>
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<title type='html'>Implementation of Bioinformatics Methods for miRNA and Metabolic Modelling,</title>
<summary type='html'>Saman Zeeshan (2014) &lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid37</id>
<updated>2014-10-22T17:33:16Z</updated>
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<title type='html'>Applying WEKA towards Machine Learning with Genetic Algorithm and Back Propagation Neural Networks</title>
<summary type='html'>Z Ahmed, Saman Zeeshan (2014)  &lt;i&gt;Journal of Data Mining in Genomics &amp; Proteomics&lt;/i&gt; 5: 2 &lt;br/&gt;</summary>
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<id>http://publicationslist.org/saman.majeed/refid39</id>
<updated>2014-10-22T17:36:38Z</updated>
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<title type='html'>Supplementary Material: Software Applications Toward Quantitative Metabolic Flux Analysis and Modeling</title>
<summary type='html'>Dandekar T, Fieselmann A, Saman Zeeshan, Z Ahmed: (2014)  &lt;i&gt;Briefings in Bioinformatics, Oxford University Press&lt;/i&gt;&lt;br/&gt;</summary>
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<id>http://publicationslist.org/saman.majeed/refid40</id>
<updated>2014-10-22T17:37:29Z</updated>
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<title type='html'>Supplementary Material: Software LS-MIDA for efficient mass isotopomer distribution analysis in metabolic modelling. </title>
<summary type='html'>Z Ahmed, Saman Zeeshan, Huber C, Hensel M, Schomburg D, Muench R, Eisenreich W, Dandekar T. (2013)  &lt;i&gt;BMC Bioinformatics, BioMed Central Publisher.&lt;/i&gt;&lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid32</id>
<updated>2014-10-22T17:25:49Z</updated>
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<title type='html'>Software LS-MIDA for Efficient Mass Isotopomer Distribution Analysis in Metabolic Modelling</title>
<summary type='html'>Z Ahmed, Saman Zeeshan,  C. Huber, M. Hensel., D. Schomburg, R. Münch, W. Eisenreich, and T. Dandekar.  (2013)  &lt;i&gt;BMC Bioinformatics&lt;/i&gt; 14: 218 &lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid16</id>
<updated>2014-10-22T17:28:14Z</updated>
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<title type='html'>Role of Ontology in NLP Grammar Construction for Semantic based Search Implementation in Product Data Management Systems</title>
<summary type='html'>Z. Ahmed, T. Dandekar, Saman Zeeshan (2012)  &lt;i&gt;Int. Jr. Mgmt., IT &amp; Eng.&lt;/i&gt; 2: 2 1-40&lt;br/&gt;</summary>
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<entry>
<id>http://publicationslist.org/saman.majeed/refid21</id>
<updated>2014-10-22T17:27:59Z</updated>
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<title type='html'>ADAM; Transiting PDM into Clinical Patient Data Management</title>
<summary type='html'>Z. Ahmed, T. Dandekar, Saman Zeeshan (2012)  &lt;i&gt; International Journal of Emerging Sciences&lt;/i&gt; 2: 2 280-299&lt;br/&gt;</summary>
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<entry>
<id>http://publicationslist.org/saman.majeed/refid18</id>
<updated>2014-10-22T17:28:06Z</updated>
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<title type='html'>Semantic Web; Ontology Specific Languages for Web Application Development</title>
<summary type='html'>Z. Ahmed, T. Dandekar, Saman Zeeshan (2012)  &lt;i&gt;International Journal of Web Applications&lt;/i&gt; 4: 1 33-41&lt;br/&gt;</summary>
</entry>
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<id>http://publicationslist.org/saman.majeed/refid19</id>
<updated>2014-10-22T17:29:49Z</updated>
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<title type='html'>Isotopo: Software towards Quantitative MIDA, Visualization and Data Management</title>
<summary type='html'>Z.Ahmed, Saman Zeeshan, Wolfgang.E, Dandekar.T. (2012)  &lt;i&gt;The Fifth Annual NEDB Summit, Computer Science and Artificial Intelligence Laboratory (CSAIL),The Massachusetts Institute of Technology (MIT), USA&lt;/i&gt;&lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid24</id>
<updated>2014-10-22T17:27:41Z</updated>
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<title type='html'>Unified Modeling and HCI Mockup Designing towards MIDA</title>
<summary type='html'>Z. Ahmed, Saman Zeeshan, T. Dandekar (2012)  &lt;i&gt;International Journal of Emerging Sciences, E-ISSN 2222-4254,&lt;/i&gt; 2: 3 361-382,&lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid31</id>
<updated>2014-10-22T17:26:04Z</updated>
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<title type='html'>Computational Feature Performance and Domain Specific Architecture Evaluation of Software Applications towards Metabolic Flux Analysis</title>
<summary type='html'>Z Ahmed, Saman Zeeshan, T Dandekar (2012)  &lt;i&gt;Recent Patents on Computer Science, Bentham Science&lt;/i&gt; 5: 3 165-176&lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid30</id>
<updated>2014-10-22T17:26:17Z</updated>
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<title type='html'>Formal UML Modelling of Isotopo; A Bioinformatical Software for Mass Isotopomers Distribution Analysis</title>
<summary type='html'>Z Ahmed, Saman Zeeshan, T Dandekar (2012)  &lt;i&gt;Software Engineering Journal, E-ISSN: 2162-8408, SAP Publishing.&lt;/i&gt; 2: 5 147-159&lt;br/&gt;</summary>
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<id>http://publicationslist.org/saman.majeed/refid27</id>
<updated>2014-10-22T17:29:21Z</updated>
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<title type='html'>Isotopo towards Quantitative Mass Isotopomers Distribution Analysis using Spectral Data</title>
<summary type='html'>Z Ahmed, Saman Zeeshan, Eisenreich W, Dandekar T (2012)  &lt;i&gt;the 9th Symposium on the Practical Applications of Mass Spectrometry in the Biotechnology Industry, San Diego, California USA&lt;/i&gt;&lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid9</id>
<updated>2014-10-22T17:28:49Z</updated>
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<title type='html'>Implementing Computerized and Digitally Mobile Home Automation System towards Electric Appliance Control and Security System</title>
<summary type='html'>Z. Ahmed, M. Ali, Saman Zeeshan (2011)  &lt;i&gt; International Journal of Emerging Sciences&lt;/i&gt; 1: 3 487-503&lt;br/&gt;</summary>
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<id>http://publicationslist.org/saman.majeed/refid11</id>
<updated>2014-10-22T17:28:37Z</updated>
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<title type='html'>Towards the Contribution of NEMDBs in Global Genetic Heterogeneity</title>
<summary type='html'>Saman Zeeshan (2011)  &lt;i&gt; International Journal of Emerging Sciences&lt;/i&gt; 1: 3 433-443&lt;br/&gt;</summary>
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<id>http://publicationslist.org/saman.majeed/refid10</id>
<updated>2014-10-22T17:28:44Z</updated>
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<title type='html'>Machine Learning and Data Optimization using BPNN and GA in DOC</title>
<summary type='html'>Z. Ahmed, Saman Zeeshan (2011)  &lt;i&gt; International Journal of Emerging Sciences&lt;/i&gt; 1: 2 108-119&lt;br/&gt;</summary>
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<id>http://publicationslist.org/saman.majeed/refid15</id>
<updated>2014-10-22T17:28:25Z</updated>
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<title type='html'>NLP Syntax Structure using ANTLR in I-SOAS</title>
<summary type='html'>Z. Ahmed, Saman Zeeshan (2011)  &lt;i&gt;International Journal of Information Technology and Engineering&lt;/i&gt; 2: 2 51-57&lt;br/&gt;</summary>
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<id>http://publicationslist.org/saman.majeed/refid13</id>
<updated>2014-10-22T17:29:59Z</updated>
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<title type='html'>Intelligent Information Management for efficient Computational Biology  </title>
<summary type='html'>Z. Ahmed, Saman Zeeshan, T. Dandekar et al. 
 (2011)  &lt;i&gt; Information and Networking Day: Intelligent Information Management, by Information and Communication Technology Research (ICT), European Commission&lt;/i&gt;&lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid14</id>
<updated>2014-10-22T17:28:31Z</updated>
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<title type='html'>Middleware Technologies; Chain Web Grid Services </title>
<summary type='html'>Z. Ahmed, Saman Zeeshan (2011)  &lt;i&gt;International Journal of Web Applications&lt;/i&gt; 3: 4 197-205&lt;br/&gt;</summary>
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<entry>
<id>http://publicationslist.org/saman.majeed/refid4</id>
<updated>2014-10-22T17:29:06Z</updated>
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<title type='html'>Towards Design and Implementation of a Language Technology based Information Processor for PDM Systems</title>
<summary type='html'> Z. Ahmed,  Saman Zeeshan, T. Dandekar (2010)  &lt;i&gt;IST Transactions of Information Technology- Theory and Applications,&lt;/i&gt; 1: 1 1-7&lt;br/&gt;</summary>
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<entry>
<id>http://publicationslist.org/saman.majeed/refid3</id>
<updated>2014-10-22T17:23:15Z</updated>
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<title type='html'>Interactive Web Graphical User Interface (GUI) for Phylogenetic Trees</title>
<summary type='html'>This research monograph is based on conducted research and development work for a project by University of Geneva, Switzerland. It discusses the concept of computational phylogenetics with respect to construction of phylogenetic trees from their conventional NEWICK format using Perl programming language, specifically BioPerl. The research presents an open source API (Application Programming Interf...&lt;br/&gt;&lt;br/&gt;Saman Zeeshan (2010)  1:&lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid5</id>
<updated>2014-10-22T17:28:58Z</updated>
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<title type='html'>Towards Increase in Quality by Preprocessed Source Code and Measurement Analysis of Software Applications</title>
<summary type='html'>Z. Ahmed, Saman Zeeshan (2010)  &lt;i&gt;IST Transactions of Information Technology- Theory and Applications&lt;/i&gt; 1: 1 8-15&lt;br/&gt;</summary>
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<entry>
<id>http://publicationslist.org/saman.majeed/refid1</id>
<updated>2012-06-17T12:06:07Z</updated>
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<title type='html'>Towards Human Platelet differentiation and the role of miRNAs in Platelet Gene Expression</title>
<summary type='html'>Saman. M (2010) &lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid8</id>
<updated>2014-10-22T17:30:22Z</updated>
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<title type='html'>GDP: Genetic Disease Database of Pakistan</title>
<summary type='html'>Saman Zeeshan (2009)  &lt;i&gt;Current Trends in Bioinformatics, Seminar Hall, COMSATS Institute of Information Technology, April 04, Islamabad Pakistan&lt;/i&gt;&lt;br/&gt;</summary>
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<entry>
<id>http://publicationslist.org/saman.majeed/refid2</id>
<updated>2014-10-22T17:30:16Z</updated>
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<title type='html'>Interactive Web Graphical User Interface (GUI) for Phylogenetic Trees</title>
<summary type='html'>Saman Zeeshan (2008)  &lt;i&gt;Department of Bioinformatics- Institute of Information Technology- COMSATS University Pakistan and Zdobnov's Computational Evolutionary Genomics group- Faculty of Medicine- University of Geneva Switzerland&lt;/i&gt;&lt;br/&gt;</summary>
</entry>
<entry>
<id>http://publicationslist.org/saman.majeed/refid7</id>
<updated>2014-10-22T17:30:09Z</updated>
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<title type='html'>GDP-A Database of Genetic Diseases in Pakistan</title>
<summary type='html'>Saman Zeeshan, Mehtab Azizi, M. Ansar (2007)  &lt;i&gt;1st Symposium on Microbiology and Molecular Genetics on Genomics, Proteomics, Metabolomics: Recent Trends in Biotechnology&lt;/i&gt; &lt;br/&gt;</summary>
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