// +author:alvarez 
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{userid:"a.april",  _fulltext:1,  _thumb:'_thumb.png', "refid":570,"repocollections":"","attachment":"ref-570\/Rapport_Diego_Alvarez_final.pdf","_thumb":"_thumb.png","articletype":"mastersthesis","sectionheading":"","title":"Le Big Data dans le domaine de la g\u00e9nomique","year":"2016","author":"D Alvarez","school":"projet de maitrise appliqu\u00e9 de 9 cr\u00e9dits en G\u00e9nie Logiciel, \u00c9cole de Technologie Sup\u00e9rieure","address":"1100 Notre-Dame Ouest, Montr\u00e9al, Qu\u00e9bec, Canada H3C 1K3","doi":"","pubmed":"","pdflink":"","urllink":"","abstract":"Ce rapport de projet appliqu\u00e9 de 9 cr\u00e9dits, \u00e0 la ma\u00eetrise en g\u00e9nie logiciel, a pour but de pr\u00e9senter la d\u00e9marche effectu\u00e9e afin de traiter et d\u2019adapter, au format ADAM de l\u2019Universit\u00e9 de Californie \u00e0 Berkeley, les g\u00e9notypes imput\u00e9s provenant du logiciel d\u2019imputation IMPUTE2 (et d\u2019autre logiciel g\u00e9n\u00e9rant le m\u00eame format de fichiers) et de les int\u00e9grer aux donn\u00e9es des bases de donn\u00e9es ADVANCE et dbSNP.\r\n\r\nLe projet libre ADAM, originaire de l\u2019Universit\u00e9 de Californie \u00e0 Berkeley, est un ensemble de formats de fichiers, interfaces et outils con\u00e7us pour standardiser le format des donn\u00e9es et permettre la mise \u00e0 l\u2019\u00e9chelle du traitement des donn\u00e9es massives pr\u00e9sentes dans le domaine de la g\u00e9nomique.\r\n\r\nLe logiciel IMPUTE2 (c.-\u00e0-d. IMPUTE version 2), d\u00e9velopp\u00e9 par l\u2019Universit\u00e9 d\u2019Oxford, est un programme d\u2019imputation des g\u00e9notypes (c.-\u00e0-d. d\u2019inf\u00e9rence statistique de g\u00e9notypes non observ\u00e9s) bas\u00e9 sur des haplotypes observ\u00e9s. Ce logiciel g\u00e9n\u00e8re deux formats de fichiers, les \u00ab .gen \u00bb, qui contiennent les probabilit\u00e9s d\u2019occurrence d\u2019un g\u00e9notype donn\u00e9 pour chaque individu \u00e9tudi\u00e9, et le \u00ab .sample \u00bb, qui contient l\u2019information des individus \u00e9tudi\u00e9s.\r\n\r\nL\u2019objectif de mon projet est d\u2019\u00e9tendre celui de l\u2019\u00e9tudiant Simon Grondin, en documentant les pr\u00e9requis et activit\u00e9s n\u00e9cessaires pour reproduire son projet et en effectuant les \u00e9tapes n\u00e9cessaires pour g\u00e9n\u00e9rer un nouveau jeu de donn\u00e9es contenant les g\u00e9notypes imput\u00e9s d\u2019IMPUTE2 ainsi que les donn\u00e9es cliniques des patients d\u2019ADVANCE en format ADAM.","note":"","tags":"HPC genetic sequencer, UC Berkeley ADAM format extension, ADVANCE clinical data","weight":570}
,

{userid:"andresmauricioalvarez07", "articletype":"article","pages":"","author":"Andres M Alvarez","year":"2014","title":"Reply: To PMID 24093690.","month":"Jan","journal":"Orthopedics","publisher":"","volume":"37","number":"1","note":"","tags":"Acetabulum,Arthroplasty, Replacement, Hip,Humans","booktitle":"","editor":"","abstract":"","address":"","school":"","issn":"1938-2367","doi":"","isi":"","pubmed":"24683645","key":"Alvarez2014","howpublished":"","urllink":"","refid":3,"weight":3}
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{userid:"kelly-alvarez", "refid":"9","attachment":"","_thumb":"","articletype":"article","sectionheading":"","title":"Metallic scaffolds for bone regeneration","year":"2009","author":"K. Alvarez, H. Nakajima","journal":"Materials","volume":"2 (3)","number":"","pages":"790-832.","month":"","doi":"10.3390\/ma2030790","pubmed":"","pdflink":"http:\/\/mdpi.com\/1996-1944\/2\/3\/790","urllink":"","abstract":"Bone tissue engineering is an emerging interdisciplinary field in Science, combining expertise in medicine, material science and biomechanics. Hard tissue engineering research is focused mainly in two areas, osteo and dental clinical applications. There is a lot of exciting research being performed worldwide in developing novel scaffolds for tissue engineering. Although, nowadays the majority of the research effort is in the development of scaffolds for non-load bearing applications, primarily using soft natural or synthetic polymers or natural scaffolds for soft tissue engineering; metallic scaffolds aimed for hard tissue engineering have been also the subject of in vitro and in vivo research and industrial development. In this article, descriptions of the different manufacturing technologies available to fabricate metallic scaffolds and a compilation of the reported biocompatibility of the currently developed metallic scaffolds have been performed. Finally, we highlight the positive aspects and the remaining problems that will drive future research in metallic constructs aimed for the reconstruction and repair of bone.","note":"","tags":"Metallic bone scaffolds, Biocompatible metals, Load-bearing porous structures, 3-D metallic constructs, Bone tissue engineering."}
,

{userid:"kelly-alvarez", "refid":"10","repocollections":"","attachment":"","_thumb":"","articletype":"inproceedings","sectionheading":"","title":"Lotus-type Porous Ni-free Stainless Steel Biomaterial Produced by Continuous Zone Melting Technique","year":"2008","author":"K. Alvarez, H. Nakajima","booktitle":"Proceedings of the International Symposium Cellular Metals for Structural and Functional Applications (CellMet 2008)","editor":"CellMet, Dresden, Germany","pages":"301-306","organization":"","address":"","publisher":"","doi":"","pubmed":"","pdflink":"","urllink":"","abstract":"Lotus-type porous Ni-free stainless steels with long straight pores aligned parallel to the solidification direction were fabricated by continuous zone melting technique. Ni-free stainless steel is defined here as a steel with a nickel content of at most\u30000.3 wt.%\u3000Ni, which also meets the medically indicated requirements for the absence of nickel. In this paper, an overview of the characterization results relevant to potential medical applications of this Lotus-type porous Ni-free stainless steel is given. Measured material properties include magnetic properties, compressive yield strength, Young\u2019s modulus and pitting corrosion resistance in several environments. Biological tests were performed in order to elucidate if the fabricated material effectively could be used as a biomaterial. In vitro osteoblasts cell spreading and proliferation assays were done. Additionally, in vivo test was performed to evaluate bone tissue response to Lotus-type porous Ni-free austenitic stainless steel using Sprague-Dawley rats for 12 weeks of implantation time. No apparent adverse reactions were noted on or around the implanted material. On the contrary, bone ingrowth with significantly direct bone-contacts was found inside the porous spaces.","note":"","tags":""}
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{userid:"SEP", "refid":1261,"repocollections":"","attachment":"","_thumb":"","articletype":"article","sectionheading":"","title":"Current Overview of Cyclic Steam Injection Process","year":"2013","author":" Johannes Alvarez, Sungyun Han","journal":"Journal of Petroleum Science Research (JPSR)","volume":"2","number":"3","pages":"116-127","month":"7","doi":"","pubmed":"","pdflink":"http:\/\/www.jpsr.org\/Download.aspx?ID=5755","urllink":"http:\/\/www.jpsr.org\/paperInfo.aspx?ID=5755","abstract":"Cyclic Steam Injection (CSI) is an effective thermal recovery process, in which, several driving mechanisms define the success of the process; i.e. viscosity reduction, wettability alteration, gas expansion, etc. This process was first applied in late 1950s. Then, it has been applied world-wide successfully to both light and heavy oil reservoirs. To increase the effectiveness of CSI, process was varied by chemical addition to steam, application of horizontal wells and introduction of hydraulic fracturing. With these modern technologies, average 15% of recovery factor of conventional CSI producers back in 1980\u2019s boosted up to approximately 40%. The method is attractive because it gives quick payout at relatively high success rate due to cumulative field development experiences. However, this is still uncompetitive in terms of ultimate recovery factor compared to that of other steam drive methods such as steam flooding (50-60% OOIP) or SAGD (60-70% OOIP). Recent studies related to the CSI have focused on either the optimization of chemical additives and fracture design or questioning on geomechanical solutions to poroelastic effects. In addition, most papers discuss about follow-up process posterior to CSI such as in-situ combustion, CO2 injection and steam flooding. This study is oriented to overview of the past and current status of CSI process in technical aspects with discussion of commercial cases throughout the world. A summarized review is given on the potential importance of encouragement of further investigation of Cyclic Steam Injection.","note":"","tags":"Cyclic Steam Injection; Cyclic Steam Stimulation; Huff n\u2019 Puff; Thermal Enhanced Oil Recovery ","weight":1261}
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{userid:"j.a.alvarez-fernandez", "refid":"1","repocollections":"","attachment":"","_thumb":"","articletype":"article","sectionheading":"","title":"Transcranial Doppler and Transcranial Duplex are not exclusive but complementary.","year":"2008","author":"J A Alvarez-Fern\u00e1ndez","journal":"Med Intensiva","volume":"32 (9)","number":"","pages":"315","month":"Aug\/Sep","doi":"","pubmed":"18601840","pdflink":"http:\/\/www.elsevier.es\/watermark\/ctl_servlet?_f=10&pident_articulo=13124341&pident_usuario=0&pcontactid=&pident_revista=64&fichero=64v32n06a13124341pdf001.pdf&ty=91&accion=L&origen=elsevier&web=www.elsevier.es&lan=es","urllink":"","abstract":"","note":"","tags":""}
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{userid:"j.a.alvarez-fernandez", "refid":"6","attachment":"","articletype":"article","sectionheading":"","title":"Training in disasters for medical specialists","year":"2007","author":"JA Alvarez-Fern\u00e1ndez","journal":"Med Clin (Barc)","volume":"128","number":"1","pages":"34-5; author reply 35","month":"Jan","doi":"","pubmed":"17266891","pdflink":"","urllink":"","abstract":"","note":"","tags":"Disaster Planning,Education, Medical,Humans,Relief Work,Spain,Specialties, Medical"}
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{userid:"j.a.alvarez-fernandez", "refid":"13","attachment":"","articletype":"article","sectionheading":"","title":"Poor trends in cardiac arrest mortality in Spain","year":"2003","author":"J A Alvarez Fern\u00e1ndez","journal":"Rev Clin Esp","volume":"203","number":"11","pages":"513-516","month":"Nov","doi":"","pubmed":"14599389","pdflink":"http:\/\/www.elsevier.es\/watermark\/ctl_servlet?_f=10&pident_articulo=13052581&pident_usuario=0&pcontactid=&pident_revista=65&fichero=65v203n11a13052581pdf001.pdf&ty=151&accion=L&origen=elsevier&web=www.elsevier.es&lan=es","urllink":"","abstract":"","note":"","tags":"Cardiopulmonary Resuscitation,Heart Arrest,Humans,Spain,Ventricular Fibrillation"}
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{userid:"j.a.alvarez-fernandez", "refid":"14","attachment":"","articletype":"article","sectionheading":"","title":"Survival after cardiac arrest","year":"2002","author":"J A Alvarez Fern\u00e1ndez","journal":"Rev Clin Esp","volume":"202","number":"12","pages":"658-664","month":"Dec","doi":"","pubmed":"12459096","pdflink":"http:\/\/www.elsevier.es\/watermark\/ctl_servlet?_f=10&pident_articulo=13040518&pident_usuario=0&pcontactid=&pident_revista=65&fichero=65v202n12a13040518pdf001.pdf&ty=58&accion=L&origen=elsevier&web=www.elsevier.es&lan=es","urllink":"","abstract":"","note":"","tags":"Biomedical Research,Heart Arrest,Humans,Prognosis,Survival Rate"}
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{userid:"j.a.alvarez-fernandez", "refid":"15","attachment":"","_thumb":"","articletype":"article","sectionheading":"","title":"Health care response in disasters. Lessons learned from the terrorist attack against the Twin Towers of New York City","year":"2001","author":"J A Alvarez Fern\u00e1ndez","journal":"Med Clin (Barc)","volume":"117","number":"20","pages":"790-792","month":"Dec","doi":"","pubmed":"11784511","pdflink":"http:\/\/www.elsevier.es\/watermark\/ctl_servlet?_f=10&pident_articulo=13023720&pident_usuario=0&pcontactid=&pident_revista=2&fichero=2v117n20a13023720pdf001.pdf&ty=18&accion=L&origen=elsevier&web=www.elsevier.es&lan=es","urllink":"","abstract":"","note":"","tags":"Disaster Planning,Humans,New York,Rescue Work,Terrorism"}
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